LINC02347

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC02347 mutation is significantly associated with the RNA expression of many other genes, with 50 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC02347-associated genes across cancer lineages are RNA5SP35, HMGB4, and RNA5SP250. Each is linked with LINC02347 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC02347-to-partner and partner-to-LINC02347 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02347→partner) and Y-score (partner→LINC02347) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNA5SP35 →+0.486+3.889<.001<.00132
CESCHMGB4 →+0.015+5.306<.001.00631
CESCRNA5SP250 →+0.360+6.837<.001<.00131
CESCRNU6-1066P →+0.428+5.418<.001.00531
CESCOR5G5P →+0.103+5.201<.001.00731
CESCRNU1-78P →+0.398+7.584<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 50 associations by consensus.

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