LINC02340

Across TCGA patient cohorts, LINC02340 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,118 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible LINC02340-associated GO terms across cancer lineages are RNA methylation, Positive regulation of amide metabolic process, and DNA modification. Each is linked with LINC02340 in more than 26 cancer types. Because this analysis shows association rather than direction, both LINC02340-to-partner and partner-to-LINC02340 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA methylation grouped by LINC02340-low versus LINC02340-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02340→partner) and Y-score (partner→LINC02340) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	RNA methylation →	+0.063	+0.474	<.001	<.001	3	27
STAD	Positive regulation of amide metabolic process →	+0.065	+0.432	<.001	<.001	3	27
STAD	DNA modification →	+0.054	+0.448	<.001	<.001	3	27
STAD	tRNA processing →	+0.064	+0.386	<.001	<.001	3	27
STAD	Positive regulation of translation →	+0.066	+0.437	<.001	<.001	3	26
STAD	Telomere organization →	+0.064	+0.491	<.001	<.001	3	26

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,118 associations by consensus.

RNA methylation by LINC02340 expression — STAD

Explore this box plot interactively →