LINC02258

Across TCGA patient cohorts, LINC02258 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,487 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02258-associated GO terms across cancer lineages are Endosomal transport, Osteoblast differentiation, and DNA-templated transcription termination. Each is linked with LINC02258 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC02258-to-partner and partner-to-LINC02258 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Endosomal transport grouped by LINC02258-low versus LINC02258-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02258→partner) and Y-score (partner→LINC02258) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Endosomal transport →	+0.157	+0.065	<.001	.005	3	7
STAD	Osteoblast differentiation →	+0.113	+0.033	<.001	.005	3	6
STAD	DNA-templated transcription termination →	+0.139	+0.070	<.001	.002	3	6
STAD	Regulation of proteasomal protein catabolic process →	+0.164	+0.064	<.001	.002	3	6
STAD	Methylation →	+0.146	+0.037	<.001	.002	3	6
STAD	Endosome organization →	+0.178	+0.073	<.001	.002	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,487 associations by consensus.

Endosomal transport by LINC02258 expression — STAD

Explore this box plot interactively →