LINC02228

Across TCGA patient cohorts, LINC02228 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,303 significant associations in total. THYM shows the largest number of these associations.

The most reproducible LINC02228-associated GO terms across cancer lineages are tRNA transport, Glycosylation, and Telomere maintenance via telomere lengthening. Each is linked with LINC02228 in more than 16 cancer types. Because this analysis shows association rather than direction, both LINC02228-to-partner and partner-to-LINC02228 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, tRNA transport grouped by LINC02228-low versus LINC02228-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02228→partner) and Y-score (partner→LINC02228) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	tRNA transport →	+0.066	+0.551	<.001	.001	3	16
ESCA	Glycosylation →	+0.044	+0.522	.001	.004	2	17
STAD	Telomere maintenance via telomere lengthening →	+0.049	+0.258	<.001	<.001	3	16
ESCA	Establishment of mitotic sister chromatid cohesion →	+0.079	+0.362	<.001	.002	3	16
STAD	Golgi vesicle transport →	+0.087	+0.344	<.001	<.001	3	16
ESCA	Regulation of translational initiation in response to stress →	+0.069	+0.349	<.001	.007	1	17

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,303 associations by consensus.

tRNA transport by LINC02228 expression — ESCA

Explore this box plot interactively →