LINC02197

Across TCGA patient cohorts, LINC02197 mutation is significantly associated with the RNA expression of many other genes, with 486 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC02197-associated genes across cancer lineages are RNU6-165P, RN7SL147P, and MIR3125. Each is linked with LINC02197 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC02197-to-partner and partner-to-LINC02197 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-165P grouped by LINC02197-low versus LINC02197-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02197→partner) and Y-score (partner→LINC02197) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	RNU6-165P →	+0.587	+7.741	<.001	.009	3	2
UCEC	RN7SL147P →	+0.186	+2.550	.003	.006	3	1
UCEC	MIR3125 →	+0.620	+2.472	.005	.005	3	1
UCEC	MIR3192 →	+0.441	+2.447	.007	.006	3	1
UCEC	IGHV1OR15-4 →	+0.124	+3.522	<.001	.003	3	1
UCEC	COPS8P1 →	+0.131	+2.900	<.001	.002	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 486 associations by consensus.

RNU6-165P by LINC02197 expression — COAD

Explore this box plot interactively →