LINC02143

Across TCGA patient cohorts, LINC02143 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,852 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02143-associated GO terms across cancer lineages are Protein-DNA complex assembly, Telomere maintenance, and Development of primary sexual characteristics. Each is linked with LINC02143 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC02143-to-partner and partner-to-LINC02143 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein-DNA complex assembly grouped by LINC02143-low versus LINC02143-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02143→partner) and Y-score (partner→LINC02143) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Protein-DNA complex assembly →	+0.146	+0.019	<.001	.005	3	6
STAD	Telomere maintenance →	+0.141	+0.042	<.001	<.001	3	6
ESCA	Development of primary sexual characteristics →	+0.110	+0.036	<.001	.005	2	7
STAD	snRNA transcription →	+0.114	+0.044	<.001	<.001	3	6
STAD	Protein localization to cytoskeleton →	+0.134	+0.050	<.001	<.001	3	5
STAD	Nucleoside phosphate biosynthetic process →	+0.145	+0.046	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,852 associations by consensus.

Protein-DNA complex assembly by LINC02143 expression — ESCA

Explore this box plot interactively →