LINC02060

associated omics data
long intergenic non-protein coding RNA 2060Genealiases: []

Q-omics provides the consensus-scored LINC02060 profile across patient tissues and cancer cell-line models. LINC02060 expression is associated with patient survival in 18 of 34 cancer types, with the highest sampling consensus in BRCA. Among the 18 cancer types available for tumor–normal comparison, LINC02060 is differentially expressed in 4, with the highest sampling consensus in KIRC. Additionally, LINC02060 RNA expression shows 14,290 significant gene co-expression associations, with the highest sampling consensus in UVM. Together, these results highlight BRCA, KIRC, and UVM as cancer lineages where LINC02060 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes LINC02060 survival associations across molecular data types. LINC02060 RNA expression shows survival associations in the most cancer types (18). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
LINC02060 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier18BRCA (21)view →
This table ranks reproducible LINC02060 RNA expression–survival associations across cancer types. High LINC02060 expression shows unfavorable associations in LUAD, BLCA, CHOL and ESCA, but favorable associations in BRCA and COAD. The BRCA Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p = .003). Together, the overview and detailed table identify BRCA as the clearest survival context for LINC02060 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
BRCAOSMedianIII,IV0.9580.860.00321view →
COADOSMedianIV0.9000.379.01820view →
LUADDFSTertileII,III,IV0.3090.550.01519view →
BLCAOSQuartileIV0.2330.643.00118view →
CHOLOSQuartileII,III,IV0.3571.000.00817view →
ESCAOSTertileIV0.2200.758.03812view →
Pink = unfavorable, green = favorable. all 18 lineages →

LINC02060-BRCA (OS)

Kaplan–Meier survival curve for LINC02060 RNA expression in BRCA: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes LINC02060 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 4. The strongest signals are observed in KIRC for RNA.
LINC02060 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot4KIRC (4)view →
This table ranks reproducible tumor–normal expression differences for LINC02060. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. LINC02060 shows lower tumor expression in ESCA and higher tumor expression in KIRC, THCA and CHOL. The KIRC box plot shows higher LINC02060 RNA expression in tumor versus normal tissue (log2 FC = +0.111, t-test p = .008).
LineageGenderStageFold-changepSampling consensus
KIRCFemaleAll+0.111.0084view →
THCAAllAll+0.059.0042view →
ESCAAllAll−0.240.0111view →
CHOLAllAll+0.071.0241view →
Green = repressed in tumor. all 4 lineages →

LINC02060-KIRC

Tumor-vs-normal expression box plot for LINC02060 in KIRC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with LINC02060 in patient tissues and cancer cell lines. In patient samples, LINC02060 shows the broadest associations at the RNA and protein expression levels, with UVM recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA14,290UVM (3850)view →
Protein (mass-spec)11,212GBM (8133)view →