LINC02050

Across TCGA patient cohorts, LINC02050 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,010 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02050-associated GO terms across cancer lineages are Positive regulation of chromosome organization, Positive regulation of double-strand break repair via nonhomologous end joining, and Mitochondrial RNA 3'-end processing. Each is linked with LINC02050 in more than 7 cancer types. Because this analysis shows association rather than direction, both LINC02050-to-partner and partner-to-LINC02050 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of chromosome organization grouped by LINC02050-low versus LINC02050-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02050→partner) and Y-score (partner→LINC02050) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Positive regulation of chromosome organization →	+0.059	+0.177	<.001	<.001	3	8
STAD	Positive regulation of double-strand break repair via nonhomologous end joining →	+0.041	+0.170	<.001	<.001	3	8
UCEC	Mitochondrial RNA 3'-end processing →	+0.051	+0.145	<.001	<.001	3	8
STAD	Establishment of protein localization to mitochondrial membrane →	+0.069	+0.263	<.001	<.001	3	7
STAD	Negative regulation of DNA-templated transcription, elongation →	+0.048	+0.177	<.001	<.001	3	7
STAD	Protein insertion into mitochondrial inner membrane →	+0.053	+0.174	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,010 associations by consensus.

Positive regulation of chromosome organization by LINC02050 expression — STAD

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