LINC02049

Across TCGA patient cohorts, LINC02049 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,530 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02049-associated GO terms across cancer lineages are Regulation of microtubule-based process, Cellular ketone metabolic process, and Regulation of mitochondrial membrane potential. Each is linked with LINC02049 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC02049-to-partner and partner-to-LINC02049 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of microtubule-based process grouped by LINC02049-low versus LINC02049-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02049→partner) and Y-score (partner→LINC02049) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of microtubule-based process →	+0.107	+0.048	<.001	<.001	3	7
STAD	Cellular ketone metabolic process →	+0.086	+0.088	<.001	<.001	3	7
STAD	Regulation of mitochondrial membrane potential →	+0.135	+0.085	<.001	<.001	3	7
STAD	Sulfur compound biosynthetic process →	+0.100	+0.046	<.001	<.001	3	7
STAD	Transport along microtubule →	+0.120	+0.047	<.001	<.001	3	6
STAD	Positive regulation of lipid transport →	+0.082	+0.043	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,530 associations by consensus.

Regulation of microtubule-based process by LINC02049 expression — STAD

Explore this box plot interactively →