LINC02040

Across TCGA patient cohorts, LINC02040 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,271 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02040-associated GO terms across cancer lineages are Regulation of mRNA catabolic process, Regulation of signal transduction by p53 class mediator, and Regulation of microtubule-based process. Each is linked with LINC02040 in more than 7 cancer types. Because this analysis shows association rather than direction, both LINC02040-to-partner and partner-to-LINC02040 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of mRNA catabolic process grouped by LINC02040-low versus LINC02040-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02040→partner) and Y-score (partner→LINC02040) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of mRNA catabolic process →	+0.098	+0.140	<.001	<.001	3	8
STAD	Regulation of signal transduction by p53 class mediator →	+0.116	+0.115	<.001	<.001	3	8
STAD	Regulation of microtubule-based process →	+0.086	+0.132	<.001	<.001	3	8
STAD	Protein folding →	+0.115	+0.111	<.001	<.001	3	8
STAD	Stem cell differentiation →	+0.093	+0.134	<.001	<.001	3	7
STAD	Regulation of binding →	+0.109	+0.132	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,271 associations by consensus.

Regulation of mRNA catabolic process by LINC02040 expression — STAD

Explore this box plot interactively →