LINC02017

Across TCGA patient cohorts, LINC02017 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,474 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02017-associated GO terms across cancer lineages are Mesenchyme morphogenesis, Face development, and Developmental growth involved in morphogenesis. Each is linked with LINC02017 in more than 10 cancer types. Because this analysis shows association rather than direction, both LINC02017-to-partner and partner-to-LINC02017 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Mesenchyme morphogenesis grouped by LINC02017-low versus LINC02017-high in TGCT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02017→partner) and Y-score (partner→LINC02017) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
TGCT	Mesenchyme morphogenesis →	+0.074	+0.040	.001	.001	3	11
STAD	Face development →	+0.066	+0.090	<.001	<.001	3	10
STAD	Developmental growth involved in morphogenesis →	+0.050	+0.088	<.001	<.001	3	10
TGCT	Regulation of protein kinase C activity →	+0.082	+0.038	<.001	.003	3	10
STAD	Morphogenesis of a branching structure →	+0.060	+0.092	<.001	<.001	3	9
STAD	Epithelial to mesenchymal transition →	+0.059	+0.078	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,474 associations by consensus.

Mesenchyme morphogenesis by LINC02017 expression — TGCT

Explore this box plot interactively →