LINC01977

Across TCGA patient cohorts, LINC01977 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,263 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LINC01977-associated proteins across cancer lineages are CARD6, CBX4, and CBX8. Each is linked with LINC01977 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC01977-to-partner and partner-to-LINC01977 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01977 versus CARD6 in GBM, with a Pearson correlation of -0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01977→partner) and Y-score (partner→LINC01977) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	CARD6 →	-0.368	-0.268	.003	.002	3	5
BRCA	CBX4 →	+0.405	+0.750	<.001	<.001	3	5
GBM	CBX8 →	+0.558	+0.518	<.001	<.001	3	5
GBM	CD44_S697 →	-0.613	-0.305	.003	.007	3	5
LSCC	ADNP →	+0.417	+0.627	<.001	<.001	3	5
GBM	GTF2I →	+0.391	+0.434	.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,263 associations by consensus.

LINC01977 vs CARD6 — GBM

Explore this scatter interactively →