LINC01972

Across TCGA patient cohorts, LINC01972 RNA expression is significantly associated with the protein abundance of many other proteins, with 3,076 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC01972-associated proteins across cancer lineages are TMF1, NLE1, and PFDN4_S125. Each is linked with LINC01972 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01972-to-partner and partner-to-LINC01972 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01972 versus TMF1 in CCRCC, with a Pearson correlation of 0.26.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01972→partner) and Y-score (partner→LINC01972) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CCRCC	TMF1 →	+0.200	+0.052	.002	.006	3	2
LSCC	NLE1 →	+0.287	+0.113	.001	.003	3	2
GBM	PFDN4_S125 →	+0.238	+0.086	.002	.003	3	2
LSCC	RPRD2 →	+0.179	+0.094	.006	.006	3	2
CCRCC	SERBP1 →	+0.157	+0.070	.002	.002	3	2
LSCC	SLAIN2_S88 →	-0.473	-0.181	.006	.005	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,076 associations by consensus.

LINC01972 vs TMF1 — CCRCC

Explore this scatter interactively →