LINC01953

Across TCGA patient cohorts, LINC01953 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,254 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01953-associated GO terms across cancer lineages are Transport along microtubule, Somatic diversification of immunoglobulins, and Nucleoside phosphate biosynthetic process. Each is linked with LINC01953 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC01953-to-partner and partner-to-LINC01953 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Transport along microtubule grouped by LINC01953-low versus LINC01953-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01953→partner) and Y-score (partner→LINC01953) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Transport along microtubule →	+0.098	+0.077	<.001	<.001	3	4
STAD	Somatic diversification of immunoglobulins →	+0.102	+0.050	<.001	.002	3	4
STAD	Nucleoside phosphate biosynthetic process →	+0.121	+0.074	<.001	<.001	3	4
STAD	Positive regulation of double-strand break repair via nonhomologous end joining →	+0.094	+0.071	<.001	<.001	3	4
STAD	mRNA 3'-end processing →	+0.117	+0.033	<.001	.001	3	4
STAD	Regulation of microtubule-based process →	+0.081	+0.034	<.001	.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,254 associations by consensus.

Transport along microtubule by LINC01953 expression — STAD

Explore this box plot interactively →