LINC01899

Across TCGA patient cohorts, LINC01899 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,085 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01899-associated GO terms across cancer lineages are Autophagosome organization, Vesicle-mediated transport to the plasma membrane, and Organelle fusion. Each is linked with LINC01899 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC01899-to-partner and partner-to-LINC01899 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Autophagosome organization grouped by LINC01899-low versus LINC01899-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01899→partner) and Y-score (partner→LINC01899) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Autophagosome organization →	+0.098	+0.064	<.001	<.001	3	9
STAD	Vesicle-mediated transport to the plasma membrane →	+0.099	+0.067	<.001	<.001	3	9
STAD	Organelle fusion →	+0.096	+0.061	<.001	<.001	3	9
STAD	Response to ionizing radiation →	+0.110	+0.065	<.001	<.001	3	8
STAD	Neural tube development →	+0.088	+0.069	<.001	<.001	3	8
STAD	Membrane docking →	+0.098	+0.063	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,085 associations by consensus.

Autophagosome organization by LINC01899 expression — STAD

Explore this box plot interactively →