LINC01898

Across TCGA patient cohorts, LINC01898 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,258 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01898-associated GO terms across cancer lineages are tRNA metabolic process, NADH dehydrogenase complex assembly, and rRNA modification. Each is linked with LINC01898 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC01898-to-partner and partner-to-LINC01898 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, tRNA metabolic process grouped by LINC01898-low versus LINC01898-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01898→partner) and Y-score (partner→LINC01898) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	tRNA metabolic process →	+0.095	+0.071	<.001	<.001	3	10
STAD	NADH dehydrogenase complex assembly →	+0.103	+0.070	<.001	<.001	3	8
STAD	rRNA modification →	+0.088	+0.076	<.001	<.001	3	8
STAD	Nucleobase-containing compound transport →	+0.094	+0.068	<.001	<.001	3	8
STAD	Peptidyl-lysine monomethylation →	+0.064	+0.062	<.001	<.001	3	8
STAD	DNA strand elongation →	+0.093	+0.063	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,258 associations by consensus.

tRNA metabolic process by LINC01898 expression — STAD

Explore this box plot interactively →