LINC01887

Across TCGA patient cohorts, LINC01887 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,543 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01887-associated GO terms across cancer lineages are Regulation of viral genome replication, Positive regulation of transcription by RNA polymerase I, and DNA modification. Each is linked with LINC01887 in more than 11 cancer types. Because this analysis shows association rather than direction, both LINC01887-to-partner and partner-to-LINC01887 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of viral genome replication grouped by LINC01887-low versus LINC01887-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01887→partner) and Y-score (partner→LINC01887) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of viral genome replication →	+0.051	+0.089	<.001	<.001	3	12
STAD	Positive regulation of transcription by RNA polymerase I →	+0.050	+0.087	<.001	<.001	3	12
STAD	DNA modification →	+0.035	+0.091	<.001	<.001	3	12
STAD	Viral genome replication →	+0.049	+0.088	<.001	<.001	3	12
STAD	Positive regulation of DNA repair →	+0.040	+0.086	<.001	<.001	3	12
STAD	Negative regulation of viral process →	+0.048	+0.087	<.001	<.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,543 associations by consensus.

Regulation of viral genome replication by LINC01887 expression — STAD

Explore this box plot interactively →