LINC01880

Across TCGA patient cohorts, LINC01880 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,319 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01880-associated GO terms across cancer lineages are Carbohydrate transport, Membrane docking, and Post-Golgi vesicle-mediated transport. Each is linked with LINC01880 in more than 7 cancer types. Because this analysis shows association rather than direction, both LINC01880-to-partner and partner-to-LINC01880 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Carbohydrate transport grouped by LINC01880-low versus LINC01880-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01880→partner) and Y-score (partner→LINC01880) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Carbohydrate transport →	+0.045	+0.054	<.001	<.001	3	8
STAD	Membrane docking →	+0.064	+0.050	<.001	<.001	3	8
STAD	Post-Golgi vesicle-mediated transport →	+0.077	+0.058	<.001	<.001	3	7
STAD	Golgi to plasma membrane transport →	+0.075	+0.075	<.001	<.001	3	7
STAD	Vesicle docking →	+0.052	+0.092	<.001	<.001	3	7
STAD	Obsolete selective autophagy →	+0.068	+0.053	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,319 associations by consensus.

Carbohydrate transport by LINC01880 expression — STAD

Explore this box plot interactively →