LINC01872

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LINC01872 RNA differs between tumor and matched normal tissue in 2 of 18 cancer types tested, making tumor–normal expression one of LINC01872’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where LINC01872 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types LINC01872 is over-expressed in tumor.

KIRC and KIRP are the cancer types where LINC01872 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LINC01872 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCAllIII,IV+0.047.0057view →
KIRPAllII,III,IV+0.051.0016view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 2 strongest of 2 lineages.

LINC01872–KIRC

Tumor-vs-normal expression box plot for LINC01872 RNA in KIRC.

Open the KIRC breakdown →

Exploration