LINC01843

Across TCGA patient cohorts, LINC01843 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,943 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LINC01843-associated proteins across cancer lineages are PLS1, CLINT1, and CALML4. Each is linked with LINC01843 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC01843-to-partner and partner-to-LINC01843 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01843 versus PLS1 in HNSC, with a Pearson correlation of 0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01843→partner) and Y-score (partner→LINC01843) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	PLS1 →	+0.706	+0.815	<.001	.001	3	5
COAD	CLINT1 →	+0.241	+0.531	<.001	<.001	3	5
UCEC	CALML4 →	+1.174	+0.811	<.001	<.001	3	4
BRCA	CMBL →	+0.835	+0.945	<.001	<.001	3	4
COAD	CYRIA →	-0.331	-0.452	<.001	.004	3	4
CCRCC	HINT1 →	+0.354	+0.853	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,943 associations by consensus.

LINC01843 vs PLS1 — HNSC

Explore this scatter interactively →