Across TCGA patient cohorts, LINC01839 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,246 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible LINC01839-associated proteins across cancer lineages are SYNPO2_S155, PODN, and PPP1R12B. Each is linked with LINC01839 in more than 5 cancer types. Because this analysis shows association rather than direction, both LINC01839-to-partner and partner-to-LINC01839 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01839→partner) and Y-score (partner→LINC01839) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	SYNPO2_S155 →	+1.062	+0.042	.002	.005	3	6
CCRCC	PODN →	+0.669	+0.212	<.001	.001	3	5
UCEC	PPP1R12B →	+0.815	+0.449	<.001	<.001	3	5
UCEC	PRELP →	+0.962	+0.672	<.001	.002	3	5
UCEC	SYNPO2 →	+0.643	+0.456	<.001	<.001	3	5
UCEC	TNXB →	+0.876	+0.608	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,246 associations by consensus.

Exploration

LINC01839 survival (RNA) · tumor vs normal (RNA) · all LINC01839 data types