LINC01834

Across TCGA patient cohorts, LINC01834 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,049 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01834-associated GO terms across cancer lineages are Synaptic vesicle cytoskeletal transport, Cellular modified amino acid metabolic process, and Protein-containing complex localization. Each is linked with LINC01834 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC01834-to-partner and partner-to-LINC01834 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Synaptic vesicle cytoskeletal transport grouped by LINC01834-low versus LINC01834-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01834→partner) and Y-score (partner→LINC01834) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Synaptic vesicle cytoskeletal transport →	+0.109	+0.157	<.001	<.001	3	7
STAD	Cellular modified amino acid metabolic process →	+0.095	+0.086	<.001	<.001	3	7
STAD	Protein-containing complex localization →	+0.114	+0.162	<.001	<.001	3	6
STAD	Regulation of microtubule cytoskeleton organization →	+0.127	+0.170	<.001	<.001	3	6
STAD	Arp2/3 complex-mediated actin nucleation →	+0.137	+0.165	<.001	<.001	3	6
STAD	Regulation of cellular respiration →	+0.126	+0.179	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,049 associations by consensus.

Synaptic vesicle cytoskeletal transport by LINC01834 expression — STAD

Explore this box plot interactively →