LINC01827

Across TCGA patient cohorts, LINC01827 RNA expression is significantly associated with the RNA expression of many other genes, with 7,374 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LINC01827-associated genes across cancer lineages are AIF1, CD37, and C1orf162. Each is linked with LINC01827 in more than 21 cancer types. Because this analysis shows association rather than direction, both LINC01827-to-partner and partner-to-LINC01827 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01827 versus AIF1 in KIRP, with a Pearson correlation of 0.54.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01827→partner) and Y-score (partner→LINC01827) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
KIRP	AIF1 →	+1.225	+0.643	<.001	<.001	3	22
UVM	CD37 →	+1.269	+0.126	<.001	<.001	3	20
PAAD	C1orf162 →	+1.123	+0.351	<.001	<.001	3	20
KIRP	LST1 →	+1.155	+0.651	<.001	<.001	3	20
PAAD	BTK →	+1.013	+0.283	<.001	<.001	3	19
KIRP	LY86 →	+1.474	+0.706	<.001	<.001	3	19

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,374 associations by consensus.

LINC01827 vs AIF1 — KIRP

Explore this scatter interactively →