LINC01804

Across TCGA patient cohorts, LINC01804 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,688 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01804-associated GO terms across cancer lineages are Cytoskeleton-dependent cytokinesis, Regulation of microtubule cytoskeleton organization, and Regulation of protein serine/threonine kinase activity. Each is linked with LINC01804 in more than 12 cancer types. Because this analysis shows association rather than direction, both LINC01804-to-partner and partner-to-LINC01804 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cytoskeleton-dependent cytokinesis grouped by LINC01804-low versus LINC01804-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01804→partner) and Y-score (partner→LINC01804) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Cytoskeleton-dependent cytokinesis →	+0.062	+0.171	<.001	<.001	3	12
ESCA	Regulation of microtubule cytoskeleton organization →	+0.095	+0.100	<.001	.002	2	13
STAD	Regulation of protein serine/threonine kinase activity →	+0.052	+0.180	<.001	<.001	3	12
STAD	Regulation of microtubule polymerization →	+0.058	+0.191	<.001	<.001	3	12
STAD	Retrograde transport, endosome to Golgi →	+0.061	+0.187	<.001	<.001	3	12
STAD	Mitochondrial translation →	+0.076	+0.184	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,688 associations by consensus.

Cytoskeleton-dependent cytokinesis by LINC01804 expression — STAD

Explore this box plot interactively →