LINC01800

Across TCGA patient cohorts, LINC01800 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,021 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01800-associated GO terms across cancer lineages are Viral genome replication, Lymphocyte activation involved in immune response, and CD4-positive, alpha-beta T cell activation. Each is linked with LINC01800 in more than 20 cancer types. Because this analysis shows association rather than direction, both LINC01800-to-partner and partner-to-LINC01800 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Viral genome replication grouped by LINC01800-low versus LINC01800-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01800→partner) and Y-score (partner→LINC01800) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Viral genome replication →	+0.058	+0.117	<.001	<.001	3	21
STAD	Lymphocyte activation involved in immune response →	+0.063	+0.165	<.001	<.001	3	20
STAD	CD4-positive, alpha-beta T cell activation →	+0.060	+0.155	<.001	<.001	3	20
STAD	Interleukin-2-mediated signaling pathway →	+0.081	+0.119	<.001	<.001	3	20
ESCA	Retrograde transport, endosome to Golgi →	+0.063	+0.084	<.001	.001	3	20
STAD	Regulation of lymphocyte differentiation →	+0.064	+0.145	<.001	<.001	3	20

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,021 associations by consensus.

Viral genome replication by LINC01800 expression — STAD

Explore this box plot interactively →