LINC01800

Across TCGA pan-cancer cohorts, LINC01800 RNA is linked to patient survival in 21 of 34 cancer types, making it the most broadly survival-associated LINC01800 data layer.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where higher LINC01800 RNA is associated with better disease-free survival. In most high-consensus cancer types, elevated LINC01800 expression acts as an unfavorable survival marker, although some lineages such as HNSC and COAD show a favorable association.

HNSC, COAD, and LUAD are the cancer types where LINC01800 RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.

Lineage	Measure	Split	Stage	AUC1 high	AUC2 low	p	Sampling consensus
HNSC	DFS	Median	III,IV	0.445	0.211	<.001	105	view →
COAD	DFS	Median	II,III,IV	0.824	0.606	.004	51	view →
LUAD	OS	Tertile	II,III,IV	0.800	0.630	.001	48	view →
LIHC	OS	Tertile	II,III,IV	0.508	0.741	.008	46	view →
ACC	DFS	Tertile	II,III,IV	0.197	0.665	<.001	33	view →
THCA	DFS	Tertile	II,III,IV	0.583	0.883	.006	32	view →
BRCA	OS	Median	III,IV	0.768	0.895	.002	29	view →
KIRP	DFS	Median	III,IV	0.436	0.743	.018	26	view →
UCS	OS	Median	IV	0.302	0.817	.002	24	view →
LGG	OS	Tertile	All	0.844	0.940	<.001	16	view →
READ	OS	Tertile	II,III,IV	0.901	0.467	.012	16	view →
CHOL	DFS	Tertile	All	0.830	0.241	.031	12	view →

Pink = unfavorable, green = favorable. Showing the 12 strongest of 21 lineages.

LINC01800–HNSC (DFS)

Open the HNSC breakdown →