LINC01743

Across TCGA patient cohorts, LINC01743 RNA expression is significantly associated with the protein abundance of many other proteins, with 4,000 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC01743-associated proteins across cancer lineages are TNKS1BP1_T131, TOMM70_S91, and ARID1A_S363. Each is linked with LINC01743 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01743-to-partner and partner-to-LINC01743 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01743 versus TNKS1BP1_T131 in GBM, with a Pearson correlation of -0.38.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01743→partner) and Y-score (partner→LINC01743) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	TNKS1BP1_T131 →	-0.451	-0.069	<.001	.003	3	2
UCEC	TOMM70_S91 →	+0.361	+0.588	<.001	.001	3	2
HNSC	ARID1A_S363 →	+0.521	+0.370	<.001	.004	3	2
COAD	SPAG9_S493 →	-0.438	-0.163	<.001	<.001	3	2
HNSC	SRSF12_S219 →	+1.969	+0.302	<.001	.004	3	2
HNSC	AHNAK_S5279 →	-0.472	-0.481	<.001	.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,000 associations by consensus.

LINC01743 vs TNKS1BP1_T131 — GBM

Explore this scatter interactively →