LINC01732

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC01732 mutation is significantly associated with the RNA expression of many other genes, with 13 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC01732-associated genes across cancer lineages are RNA5SP389, RNU6-1260P, and RNA5SP326. Each is linked with LINC01732 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01732-to-partner and partner-to-LINC01732 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP389 grouped by LINC01732-low versus LINC01732-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01732→partner) and Y-score (partner→LINC01732) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNA5SP389 →+1.397+5.031<.001.00931
UCECRNU6-1260P →+0.788+6.226<.001.00131
UCECRNA5SP326 →+1.644+5.771<.001.00331
UCECRNU6-268P →+0.744+5.133.002.00831
UCECRNU6-973P →+0.768+5.299<.001.00631
UCECRNU6-482P →+0.738+5.031<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 13 associations by consensus.

RNA5SP389 by LINC01732 expression — UCEC

Box plot of RNA5SP389 in LINC01732-low vs LINC01732-high samples in UCEC.

Explore this box plot interactively →

Exploration