LINC01728

Across TCGA patient cohorts, LINC01728 RNA expression is significantly associated with the RNA expression of many other genes, with 4,166 significant associations in total. LIHC shows the largest number of these associations.

The most reproducible LINC01728-associated genes across cancer lineages are LINC01855, MIR525, and RNU1-52P. Each is linked with LINC01728 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC01728-to-partner and partner-to-LINC01728 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01728 versus LINC01855 in KICH, with a Pearson correlation of 0.91.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01728→partner) and Y-score (partner→LINC01728) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
KICH	LINC01855 →	+0.959	+0.058	<.001	<.001	3	10
KIRP	MIR525 →	+0.713	+0.093	<.001	<.001	3	10
UCEC	RNU1-52P →	+0.553	+0.173	<.001	<.001	3	9
STAD	RNU6-600P →	+0.620	+0.252	<.001	<.001	3	9
STAD	MIR519A1 →	+0.734	+0.328	<.001	<.001	3	9
STAD	RN7SL323P →	+0.586	+0.153	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,166 associations by consensus.

LINC01728 vs LINC01855 — KICH

Explore this scatter interactively →