LINC01702

Across TCGA patient cohorts, LINC01702 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,978 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01702-associated GO terms across cancer lineages are Defense response to Gram-positive bacterium, Antimicrobial humoral immune response mediated by antimicrobial peptide, and Cell communication by electrical coupling. Each is linked with LINC01702 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC01702-to-partner and partner-to-LINC01702 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Defense response to Gram-positive bacterium grouped by LINC01702-low versus LINC01702-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01702→partner) and Y-score (partner→LINC01702) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Defense response to Gram-positive bacterium →	+0.044	+0.429	<.001	<.001	3	9
BLCA	Antimicrobial humoral immune response mediated by antimicrobial peptide →	+0.063	+0.201	<.001	<.001	3	9
ESCA	Cell communication by electrical coupling →	+0.052	+0.206	<.001	<.001	3	9
ESCA	Establishment of skin barrier →	+0.062	+0.245	<.001	<.001	3	8
CHOL	Terpenoid metabolic process →	+0.096	+2.515	<.001	<.001	3	8
STAD	Response to toxic substance →	+0.047	+0.175	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,978 associations by consensus.

Defense response to Gram-positive bacterium by LINC01702 expression — ESCA

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