LINC01699

Across TCGA patient cohorts, LINC01699 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,241 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible LINC01699-associated GO terms across cancer lineages are Regulation of protein ubiquitination, Mismatch repair, and DNA-templated transcription initiation. Each is linked with LINC01699 in more than 13 cancer types. Because this analysis shows association rather than direction, both LINC01699-to-partner and partner-to-LINC01699 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of protein ubiquitination grouped by LINC01699-low versus LINC01699-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01699→partner) and Y-score (partner→LINC01699) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of protein ubiquitination →	+0.058	+0.084	<.001	<.001	3	14
STAD	Mismatch repair →	+0.049	+0.079	<.001	<.001	3	13
UCEC	DNA-templated transcription initiation →	+0.056	+0.065	<.001	<.001	3	13
STAD	Glycerophospholipid metabolic process →	+0.044	+0.074	<.001	<.001	3	13
STAD	Phospholipid biosynthetic process →	+0.050	+0.079	<.001	<.001	3	13
STAD	Regulation of microtubule cytoskeleton organization →	+0.051	+0.082	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,241 associations by consensus.

Regulation of protein ubiquitination by LINC01699 expression — STAD

Explore this box plot interactively →