LINC01677

Across TCGA patient cohorts, LINC01677 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,341 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01677-associated GO terms across cancer lineages are rRNA base methylation, Mitochondrial translation, and Protein localization to mitochondrion. Each is linked with LINC01677 in more than 7 cancer types. Because this analysis shows association rather than direction, both LINC01677-to-partner and partner-to-LINC01677 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, rRNA base methylation grouped by LINC01677-low versus LINC01677-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01677→partner) and Y-score (partner→LINC01677) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	rRNA base methylation →	+0.073	+0.074	<.001	<.001	3	8
STAD	Mitochondrial translation →	+0.135	+0.082	<.001	<.001	3	8
STAD	Protein localization to mitochondrion →	+0.114	+0.086	<.001	<.001	3	7
STAD	Vesicle-mediated transport in synapse →	+0.069	+0.081	<.001	<.001	3	7
STAD	Nucleoside phosphate biosynthetic process →	+0.110	+0.083	<.001	<.001	3	7
STAD	Lipid modification →	+0.085	+0.093	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,341 associations by consensus.

rRNA base methylation by LINC01677 expression — STAD

Explore this box plot interactively →