LINC01659

Across TCGA patient cohorts, LINC01659 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,449 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC01659-associated proteins across cancer lineages are RPA1, SCML2_S511, and IWS1. Each is linked with LINC01659 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC01659-to-partner and partner-to-LINC01659 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01659 versus RPA1 in LSCC, with a Pearson correlation of 0.55.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01659→partner) and Y-score (partner→LINC01659) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	RPA1 →	+0.273	+0.650	.002	.001	3	3
LSCC	SCML2_S511 →	+0.868	+0.538	<.001	<.001	3	3
LSCC	IWS1 →	+0.207	+0.430	<.001	<.001	3	3
LSCC	L3MBTL2 →	+0.335	+0.703	<.001	<.001	3	3
LSCC	ZNF638 →	+0.219	+0.491	<.001	<.001	3	3
HNSC	CENPF_S3023 →	+0.747	+0.444	<.001	.004	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,449 associations by consensus.

LINC01659 vs RPA1 — LSCC

Explore this scatter interactively →