LINC01653

Across TCGA patient cohorts, LINC01653 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,389 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01653-associated GO terms across cancer lineages are Regulation of telomere maintenance in response to DNA damage, Protein insertion into membrane, and Protein localization to mitochondrion. Each is linked with LINC01653 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC01653-to-partner and partner-to-LINC01653 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of telomere maintenance in response to DNA damage grouped by LINC01653-low versus LINC01653-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01653→partner) and Y-score (partner→LINC01653) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of telomere maintenance in response to DNA damage →	+0.066	+0.091	<.001	<.001	3	9
STAD	Protein insertion into membrane →	+0.079	+0.098	<.001	<.001	3	9
STAD	Protein localization to mitochondrion →	+0.078	+0.092	<.001	<.001	3	9
STAD	Establishment of protein localization to mitochondrial membrane →	+0.084	+0.095	<.001	<.001	3	9
ESCA	Obsolete histone modification →	+0.077	+0.179	<.001	<.001	3	8
STAD	Obsolete regulation of histone modification →	+0.072	+0.075	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,389 associations by consensus.

Regulation of telomere maintenance in response to DNA damage by LINC01653 expression — STAD

Explore this box plot interactively →