LINC01648

Across TCGA patient cohorts, LINC01648 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,735 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible LINC01648-associated GO terms across cancer lineages are Regulation of Ras protein signal transduction, Regulation of endothelial cell migration, and Regulation of epithelial cell migration. Each is linked with LINC01648 in more than 15 cancer types. Because this analysis shows association rather than direction, both LINC01648-to-partner and partner-to-LINC01648 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of Ras protein signal transduction grouped by LINC01648-low versus LINC01648-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01648→partner) and Y-score (partner→LINC01648) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Regulation of Ras protein signal transduction →	+0.045	+0.223	<.001	<.001	3	16
THYM	Regulation of endothelial cell migration →	+0.031	+0.013	.006	.002	2	16
THYM	Regulation of epithelial cell migration →	+0.034	+0.023	.001	.001	3	15
MESO	Endothelial cell migration →	+0.038	+0.040	<.001	<.001	2	16
MESO	Regulation of endothelial cell differentiation →	+0.054	+0.053	<.001	<.001	2	16
KIRC	Endothelial cell proliferation →	+0.031	+0.113	<.001	<.001	3	14

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,735 associations by consensus.

Regulation of Ras protein signal transduction by LINC01648 expression — ESCA

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