LINC01646

Across TCGA patient cohorts, LINC01646 RNA expression is significantly associated with the RNA expression of many other genes, with 6,255 significant associations in total. COAD shows the largest number of these associations.

The most reproducible LINC01646-associated genes across cancer lineages are ANAPC15P2, OR4D9, and LINC02402. Each is linked with LINC01646 in more than 15 cancer types. Because this analysis shows association rather than direction, both LINC01646-to-partner and partner-to-LINC01646 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01646 versus ANAPC15P2 in COAD, with a Pearson correlation of 0.96.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01646→partner) and Y-score (partner→LINC01646) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	ANAPC15P2 →	+1.088	+0.398	<.001	<.001	3	16
COAD	OR4D9 →	+0.638	+0.478	<.001	<.001	3	16
COAD	LINC02402 →	+0.796	+0.298	<.001	<.001	3	14
COAD	LINC00554 →	+0.976	+0.183	<.001	<.001	3	14
COAD	VN1R7P →	+1.284	+0.478	<.001	<.001	3	14
COAD	NFILZ →	+0.950	+0.298	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,255 associations by consensus.

LINC01646 vs ANAPC15P2 — COAD

Explore this scatter interactively →