LINC01646

Across TCGA patient cohorts, LINC01646 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,482 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01646-associated GO terms across cancer lineages are Vesicle localization, Protein deacetylation, and Microtubule-based transport. Each is linked with LINC01646 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC01646-to-partner and partner-to-LINC01646 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Vesicle localization grouped by LINC01646-low versus LINC01646-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01646→partner) and Y-score (partner→LINC01646) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Vesicle localization →	+0.066	+0.252	<.001	<.001	3	9
STAD	Protein deacetylation →	+0.064	+0.271	<.001	<.001	3	9
STAD	Microtubule-based transport →	+0.054	+0.251	<.001	<.001	3	8
STAD	Regulation of calcium ion transmembrane transport →	+0.031	+0.236	<.001	<.001	3	8
STAD	Positive regulation of gluconeogenesis →	+0.063	+0.212	<.001	<.001	3	8
STAD	Determination of adult lifespan →	+0.052	+0.235	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,482 associations by consensus.

Vesicle localization by LINC01646 expression — STAD

Explore this box plot interactively →