LINC01640

Across TCGA patient cohorts, LINC01640 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,415 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC01640-associated proteins across cancer lineages are ANK2_S890, EPB41L2, and NFIX. Each is linked with LINC01640 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC01640-to-partner and partner-to-LINC01640 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01640 versus ANK2_S890 in CCRCC, with a Pearson correlation of 0.63.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01640→partner) and Y-score (partner→LINC01640) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CCRCC	ANK2_S890 →	+1.141	+0.260	<.001	<.001	3	5
GBM	EPB41L2 →	+0.333	+0.236	.003	<.001	3	5
HNSC	NFIX →	+0.465	+0.172	<.001	<.001	3	4
CCRCC	HDGFL3 →	+0.410	+0.133	<.001	<.001	3	4
GBM	TSHZ1_T852 →	+0.513	+0.200	.001	.006	3	3
GBM	VAT1L →	+0.877	+0.191	.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,415 associations by consensus.

LINC01640 vs ANK2_S890 — CCRCC

Explore this scatter interactively →