LINC01640

Across TCGA patient cohorts, LINC01640 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,453 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01640-associated GO terms across cancer lineages are Regulation of intracellular protein transport, Regulation of cell projection assembly, and Regulation of DNA replication. Each is linked with LINC01640 in more than 17 cancer types. Because this analysis shows association rather than direction, both LINC01640-to-partner and partner-to-LINC01640 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of intracellular protein transport grouped by LINC01640-low versus LINC01640-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01640→partner) and Y-score (partner→LINC01640) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of intracellular protein transport →	+0.063	+0.159	<.001	<.001	3	18
STAD	Regulation of cell projection assembly →	+0.058	+0.161	<.001	<.001	3	17
STAD	Regulation of DNA replication →	+0.054	+0.125	<.001	<.001	3	17
STAD	Regulation of microtubule cytoskeleton organization →	+0.060	+0.171	<.001	<.001	3	17
STAD	Negative regulation of DNA metabolic process →	+0.047	+0.144	<.001	<.001	3	17
STAD	Positive regulation of DNA metabolic process →	+0.059	+0.158	<.001	<.001	3	17

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,453 associations by consensus.

Regulation of intracellular protein transport by LINC01640 expression — STAD

Explore this box plot interactively →