Across TCGA patient cohorts, LINC01588 mutation is significantly associated with the total protein of many other genes, with 28 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC01588-associated genes across cancer lineages are JNK_pT183_Y185, p21, and Rab11. Each is linked with LINC01588 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01588-to-partner and partner-to-LINC01588 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01588→partner) and Y-score (partner→LINC01588) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	JNK_pT183_Y185 →	-0.223	-3.169	.015	.019	3	1
UCEC	p21 →	+0.227	+3.169	.031	.020	3	1
UCEC	Rab11 →	-0.164	-3.169	.039	.020	3	1
UCEC	Bak →	+0.399	+3.169	.003	.020	3	1
UCEC	Di-Ras3 →	-0.175	-3.169	.031	.020	2	2
UCEC	FASN →	+0.562	+3.169	.009	.020	2	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 28 associations by consensus.

Exploration

LINC01588 survival (RNA) · tumor vs normal (RNA) · all LINC01588 data types