LINC01587

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC01587 protein abundance is significantly associated with the RNA expression of many other genes, with 2,921 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC01587-associated genes across cancer lineages are DNAJA3, ABCC3, and TBRG4. Each is linked with LINC01587 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01587-to-partner and partner-to-LINC01587 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01587 versus DNAJA3 in UCEC, with a Pearson correlation of 0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01587→partner) and Y-score (partner→LINC01587) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECDNAJA3 →+0.607+1.300.007.00432
OVABCC3 →+2.814+0.855.002.00132
UCECTBRG4 →+1.158+1.113.003.00332
UCECRPS2 →+0.911+1.011.006.00432
UCECADAM15 →+0.930+1.250.004<.00132
OVXYLT2 →+1.535+0.855.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,921 associations by consensus.

LINC01587 vs DNAJA3 — UCEC

Per-sample scatter of LINC01587 vs DNAJA3 in UCEC (Pearson r = 0.33).

Explore this scatter interactively →

Exploration