LINC01566

Across TCGA patient cohorts, LINC01566 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,882 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01566-associated GO terms across cancer lineages are Negative regulation of mRNA metabolic process, Negative regulation of mRNA processing, and Membrane biogenesis. Each is linked with LINC01566 in more than 7 cancer types. Because this analysis shows association rather than direction, both LINC01566-to-partner and partner-to-LINC01566 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of mRNA metabolic process grouped by LINC01566-low versus LINC01566-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01566→partner) and Y-score (partner→LINC01566) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Negative regulation of mRNA metabolic process →	+0.096	+0.049	<.001	<.001	3	8
STAD	Negative regulation of mRNA processing →	+0.099	+0.048	<.001	<.001	3	7
STAD	Membrane biogenesis →	+0.086	+0.044	<.001	<.001	3	7
STAD	Regulation of protein export from nucleus →	+0.090	+0.051	<.001	<.001	3	7
STAD	Negative regulation of peptidase activity →	+0.072	+0.048	<.001	<.001	3	6
STAD	Regulation of exocytosis →	+0.062	+0.055	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,882 associations by consensus.

Negative regulation of mRNA metabolic process by LINC01566 expression — STAD

Explore this box plot interactively →