LINC01555

Across TCGA patient cohorts, LINC01555 mutation is significantly associated with the RNA expression of many other genes, with 13 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC01555-associated genes across cancer lineages are HSPE1-MOB4, RNU1-68P, and MIR6780A. Each is linked with LINC01555 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01555-to-partner and partner-to-LINC01555 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, HSPE1-MOB4 grouped by LINC01555-low versus LINC01555-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01555→partner) and Y-score (partner→LINC01555) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	HSPE1-MOB4 →	+0.196	+3.021	.004	.004	3	1
UCEC	RNU1-68P →	+0.104	+4.069	<.001	.008	3	1
UCEC	MIR6780A →	+0.646	+3.479	<.001	.001	3	1
UCEC	MIR6124 →	+0.431	+3.029	.004	.005	3	1
UCEC	RNU6-208P →	+0.501	+3.315	<.001	.001	3	1
UCEC	RNA5SP393 →	+0.318	+3.029	.004	.005	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 13 associations by consensus.

HSPE1-MOB4 by LINC01555 expression — UCEC

Explore this box plot interactively →