LINC01522

Across TCGA patient cohorts, LINC01522 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,019 significant associations in total. LIHC shows the largest number of these associations.

The most reproducible LINC01522-associated GO terms across cancer lineages are Late endosome to vacuole transport, Cell cycle G1/S phase transition, and Smoothened signaling pathway. Each is linked with LINC01522 in more than 15 cancer types. Because this analysis shows association rather than direction, both LINC01522-to-partner and partner-to-LINC01522 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Late endosome to vacuole transport grouped by LINC01522-low versus LINC01522-high in CHOL.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01522→partner) and Y-score (partner→LINC01522) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CHOL	Late endosome to vacuole transport →	+0.067	+0.930	<.001	<.001	3	16
LAML	Cell cycle G1/S phase transition →	+0.038	+0.070	.004	.001	2	16
TGCT	Smoothened signaling pathway →	+0.037	+0.132	<.001	<.001	3	15
TGCT	Negative regulation of chemotaxis →	+0.046	+0.131	<.001	<.001	3	14
ESCA	Endodermal cell differentiation →	+0.067	+0.403	<.001	<.001	3	14
THYM	Microtubule depolymerization →	+0.039	+0.209	<.001	<.001	3	14

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,019 associations by consensus.

Late endosome to vacuole transport by LINC01522 expression — CHOL

Explore this box plot interactively →