LINC01517

Across TCGA patient cohorts, LINC01517 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,633 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01517-associated GO terms across cancer lineages are Regulation of DNA-templated transcription initiation, Positive regulation of DNA metabolic process, and Regulation of mitochondrion organization. Each is linked with LINC01517 in more than 11 cancer types. Because this analysis shows association rather than direction, both LINC01517-to-partner and partner-to-LINC01517 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of DNA-templated transcription initiation grouped by LINC01517-low versus LINC01517-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01517→partner) and Y-score (partner→LINC01517) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of DNA-templated transcription initiation →	+0.067	+0.212	<.001	<.001	3	12
STAD	Positive regulation of DNA metabolic process →	+0.068	+0.220	<.001	<.001	3	12
ESCA	Regulation of mitochondrion organization →	+0.066	+0.273	<.001	<.001	3	11
STAD	Macromolecule methylation →	+0.064	+0.184	<.001	<.001	3	11
ESCA	Apoptotic mitochondrial changes →	+0.075	+0.203	<.001	<.001	3	11
ESCA	Regulation of double-strand break repair →	+0.074	+0.282	<.001	<.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,633 associations by consensus.

Regulation of DNA-templated transcription initiation by LINC01517 expression — STAD

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