LINC01498

Across TCGA patient cohorts, LINC01498 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,722 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01498-associated GO terms across cancer lineages are Peptidyl-lysine modification, Positive regulation of DNA metabolic process, and Endoplasmic reticulum to cytosol transport. Each is linked with LINC01498 in more than 17 cancer types. Because this analysis shows association rather than direction, both LINC01498-to-partner and partner-to-LINC01498 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Peptidyl-lysine modification grouped by LINC01498-low versus LINC01498-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01498→partner) and Y-score (partner→LINC01498) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Peptidyl-lysine modification →	+0.064	+0.095	<.001	<.001	3	18
STAD	Positive regulation of DNA metabolic process →	+0.065	+0.092	<.001	<.001	3	18
STAD	Endoplasmic reticulum to cytosol transport →	+0.068	+0.086	<.001	<.001	3	17
STAD	Positive regulation of DNA repair →	+0.062	+0.100	<.001	<.001	3	17
STAD	Ribose phosphate biosynthetic process →	+0.070	+0.081	<.001	<.001	3	17
STAD	DNA-templated transcription elongation →	+0.075	+0.091	<.001	<.001	3	17

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,722 associations by consensus.

Peptidyl-lysine modification by LINC01498 expression — STAD

Explore this box plot interactively →