LINC01489

Across TCGA patient cohorts, LINC01489 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,244 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LINC01489-associated proteins across cancer lineages are REEP4_S152, RERG, and SORBS3. Each is linked with LINC01489 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC01489-to-partner and partner-to-LINC01489 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01489 versus REEP4_S152 in BRCA, with a Pearson correlation of -0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01489→partner) and Y-score (partner→LINC01489) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	REEP4_S152 →	-0.885	-0.918	<.001	<.001	3	4
UCEC	RERG →	+1.445	+0.972	<.001	<.001	3	4
UCEC	SORBS3 →	+0.711	+0.644	<.001	.002	3	4
BRCA	SSC5D →	+0.740	+0.670	<.001	.001	3	4
UCEC	SYNPO2_S820 →	+1.669	+1.006	<.001	<.001	3	4
UCEC	TGFB1I1_S192 →	+0.735	+0.510	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,244 associations by consensus.

LINC01489 vs REEP4_S152 — BRCA

Explore this scatter interactively →