LINC01478

Across TCGA patient cohorts, LINC01478 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,658 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01478-associated GO terms across cancer lineages are Lymphocyte activation involved in immune response, Vacuolar localization, and Regulation of cell cycle G1/S phase transition. Each is linked with LINC01478 in more than 14 cancer types. Because this analysis shows association rather than direction, both LINC01478-to-partner and partner-to-LINC01478 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Lymphocyte activation involved in immune response grouped by LINC01478-low versus LINC01478-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01478→partner) and Y-score (partner→LINC01478) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Lymphocyte activation involved in immune response →	+0.055	+0.062	<.001	<.001	3	14
STAD	Vacuolar localization →	+0.054	+0.060	<.001	<.001	3	14
ESCA	Regulation of cell cycle G1/S phase transition →	+0.066	+0.142	<.001	.005	3	14
STAD	B cell activation involved in immune response →	+0.054	+0.061	<.001	<.001	3	13
STAD	Negative regulation of leukocyte migration →	+0.035	+0.037	<.001	<.001	3	13
STAD	Stress-activated protein kinase signaling cascade →	+0.054	+0.050	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,658 associations by consensus.

Lymphocyte activation involved in immune response by LINC01478 expression — STAD

Explore this box plot interactively →