LINC01471

Across TCGA patient cohorts, LINC01471 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,439 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01471-associated GO terms across cancer lineages are Vesicle localization, Cellular response to carbohydrate stimulus, and Telomerase RNA localization. Each is linked with LINC01471 in more than 10 cancer types. Because this analysis shows association rather than direction, both LINC01471-to-partner and partner-to-LINC01471 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Vesicle localization grouped by LINC01471-low versus LINC01471-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01471→partner) and Y-score (partner→LINC01471) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Vesicle localization →	+0.066	+0.075	<.001	.001	3	11
STAD	Cellular response to carbohydrate stimulus →	+0.046	+0.056	<.001	<.001	3	11
ESCA	Telomerase RNA localization →	+0.092	+0.085	<.001	.003	2	11
ESCA	Microtubule-based transport →	+0.055	+0.063	<.001	.007	2	11
ESCA	Respiratory electron transport chain →	+0.085	+0.077	<.001	.004	3	10
ESCA	Mitochondrial translation →	+0.081	+0.059	<.001	.003	2	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,439 associations by consensus.

Vesicle localization by LINC01471 expression — ESCA

Explore this box plot interactively →