LINC01428

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC01428 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,953 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01428-associated GO terms across cancer lineages are Regulation of protein serine/threonine kinase activity, Obsolete positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus, and Regulation of steroid metabolic process. Each is linked with LINC01428 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC01428-to-partner and partner-to-LINC01428 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01428→partner) and Y-score (partner→LINC01428) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADRegulation of protein serine/threonine kinase activity →+0.074+0.073<.001<.00139
STADObsolete positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus →+0.072+0.073<.001<.00139
STADRegulation of steroid metabolic process →+0.051+0.073<.001<.00139
STADRegulation of dephosphorylation →+0.078+0.066<.001<.00139
TGCTMesenchymal cell migration →+0.083+0.226<.001<.00138
STADRegulation of protein localization to nucleus →+0.087+0.067<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,953 associations by consensus.

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